New Features in Alamut version 1.4 (July 2008)
- Mutations can now be annotated and stored in variant files.
See the Managing Variants documentation.
- Alamut now has basic handling capabilities for selenocysteine residues (U).
- Indel polymorphisms from dbSNP are now displayed.
- In the splicing module, prediction scores are now displayed when the window is
in the 'Highlight Differences' mode.
- Codon frequencies are now reported for synonymous coding variants
(frequency data from Emboss Ehuman.cut).
- Nonsense mediated mRNA decay (NMD) is now reported as possible when a
mutation creates a premature termination codon more than 50 nucleotides upstream of
the final exon-exon junction.
- Talamut: Mutations extracted from PubMed abstracts are now cleanly sorted, giving users the
ability to easily find publications reporting specific variants.
Previous versions:
1.1 |
1.2 |
1.3
